J.I.Baldani; F.L.Olivares; A.S. Hemerly; F.B.Reis Jr.; A.L.M.Oliveira; V.L.Baldani; S.R. Goi; V.M. Reis and J.Dobereiner (1997). Nitrogen-fixing endophytes: recent advances in the association with graminaceous plants grown in the tropics. In: Current Plant Science and Biotechnology in Agriculture - Biological Nitrogen Fixation for the 21th Century. (C. Elmerich, A. Kondorosi and W.E. Newton, Eds). Vol.31, 203 - 206.

Vargas, C.; Lopes, A. and Hemerly, A. (1999). Adaptation of the differential display RT-PCR technique to isolate sugarcane genes induced by plant association with endophytic nitrogen-fixing bacteria. Anais da Academia Brasileira de Ciências, 71, 515-520.

Vargas, C , de Padua V.L.M., Nogueira, E.M, Masuda, H.P. Vinagre, F., Santos A.L., Ferreira, P.C.G. Baldani, J.I., and Hemerly, A.S. (2000). Characterization of a sugarcane gene that is induced by association with endophytic diazotrophic bacteria. In: Current Plant Science and Biotechnology in Agriculture - Nitrogen Fixation: From Molecules to Crop Productivity. (F. Pedrosa, M.Hungria, M. Geoffrey Yates, W. Newton, Eds.). Vol.38, 426.

Nogueira, E.M, Vinagre, F., Masuda, H.P., Vargas, C. , de Pádua, V. L. M., da Silva, F. R. , dos Santos, R. V. , Baldani,, J.I., Ferreira, P.C.G. and Hemerly, A.S. (2001). Expression of sugar cane genes induced by inoculation with Gluconacetobacter diazotrophicus and Herbaspirillum rubrisubalbicans. GMB, 24, 199-206

Andrietta, M., H., Eloy, N.B., Hemerly, A.S. and Ferreira, P.C.G. (2001). Identification of sugar cane cDNAs encoding components of the cell cycle machinery. GMB, 24, 61-68

Nogueira, E.M, Vinagre, F., Masuda, H.P., Vargas, C., de Padua V.L.M., da Silva, F.R., dos Santos, R.V., Baldani, J.I., Ferreira, P.C.G. and Hemerly, A.S. (2002). Biological Nitrogen Fixation in Sugar Cane: a Genome Perspective. In: Nitrogen Fixation: Global Perspectives, CABI Publishing (eds T Finan, M O'brian, D. Layzell, K. Vessey, W Newton), 470.

Vargas C., de Pádua V., Nogueira E.M., Vinagre F. , Masuda H.P., da Silva F.R., Baldani J.I. Ferreira P.C.G and Hemerly A.S (2003) Signaling pathways mediating the association between sugarcane and endophytic diazotrophic bacteria: a genomic approach. Simbiosys 35, 159-180.

Vincentz, M; Cara, F; Okura, V; da Silva, F.; Pedrosa, G.; Hemerly, A. S.; Capella, A.; Marins M.; Ferreira, P C G; França, S; Grivet, L.; Vettore, A.; Kemper, E.; Burnquist, W.; Targon, M. Siqueira, W.; Kuramae, E.; Marino, C.; Camrago, L.; Carrer, H.; Coutinho, L.; Furlan, L; Lemos, M; Nunes, L.; Gomes, S.; Santelli, R.; Goldman, M.; Bacci Jr, M.; Giglioti, E.; Thiemann, O.; Silva, F.; Van Sluys, M; Nobrega, F; Arruda, P.; and Menck, C F M. (2004). Evolution of monocot and eudicot divergence using the sugarcane transcriptome. Plant Physiology 134: 951-959.

Cell Cycle Control

Hemerly, A.S.; Ferreira, P.; Van Montagu, M.; and Inzé, D. (1999). Cell division and plant morphogenesis: is there an essential link? BioEssays 21, 29-37.

Hemerly, A.S.; Ferreira, P.C.G.; Van Montagu, M.; Engler, G.; Inze, D (2000) Cell division events are essential for embryo patterning and morphogenesis: studies on dominant-negative cdc2aAt mutants of Arabidopsis, Plant Journal 23 (1), 1-7.

Ramos, G.B.A., Ferreira, P.C.G. and Hemerly, A.S. (2001). DNA replication in plants: isolation of a cdc6 homolog from Arabidopsis thaliana. Journal of Experimental Botany, 364:2239-2240.

Blilou I, Frugier F, Folmer S, Serralbo O, Willemsen V, Wolkenfelt H, Eloy NB, Ferreira PC, Weisbeek P, Scheres B. (2002) The hobbit gene encodes a CDC27 homologue that links cell cycle progression to Developmental competence. Genes & Development 16(19):2566-75.

Masuda, H.P., Ramos, G.B.A, de Almeida-Engler, J., Mors, L.C., Coqueiro,V.M., Macrini, C., Ferreira, P.C.G.and Hemerly, A.S. (2004). Genome based identification and analysis of the Pre-Replicative Complex of Arabidopsis thaliana. FEBS Letters 574/1-3:192-202.

Conservation Genetics

CARDOSO, Sérgio Ricardo Sodré; LIRA, Catarina F; PEREIRA, Luisa R; FERREIRA, Paulo Cavalvanti Gomes; CARDOSO, Mônica Aires. High levels of genetic sub'structuring as a result of population fragmentation in the tropical Caesalpinia echinata Lam. Kluwer Academic Publishers. Biodiversity And Conservation, 00: 1-11, 2004. Recieved 17 April 2003; accepted in revised form 12 January 2004.

LIRA, Catarina F; CARDOSO, Sérgio Ricardo Sodré; FERREIRA, Paulo Cavalvanti Gomes; CARDOSO, Mônica Aires; PROVAN, Jim. Long term population isolation in the endangered tropical tree species revealed by choloplast microsatellites. Molecular Ecology, Blackwell Publishing Ltd, v. 12, p. 3219-3225, 2003.

CARDOSO, Mônica Aires; CARDOSO, Sérgio Ricardo Sodré; FERREIRA, Paulo Cavalvanti Gomes. Protegendo os remanescentes de pau-brasil. Ciência Hoje, SBPC, v. 29, n. 174, p. 65-68, 2001.

CARDOSO, Sérgio Ricardo Sodré; ELOY, Núbia Barbosa; CARDOSO, Mônica Aires; PROVAN, Jim; FERREIRA, Paulo Cavalvanti Gomes. Genetic differentiation of Euterpe edulis Mart. populations estimated by AFLP analysis. Molecular Ecology, v. 9, p. 1753-1760, 2000.